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Which of the following is not part of the core promoter?


A) the transcription start site
B) the Pribnow box (−10 region)
C) the −35 region
D) the UP element

E) A) and D)
F) None of the above

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The lariat mechanism has been demonstrated by observing the lariat structure using electron microscopy.

A) True
B) False

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True

The eukaryotic TATA-binding protein (TBP) functions in a manner similar to


A) sigma (σ) factor in E. coli.
B) rho (ρ) factor in E. coli.
C) lac I in E. coli.
D) CAP in E. coli.

E) A) and D)
F) B) and C)

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CREB contains the following structural motif:


A) Helix-turn-helix
B) β−barrel
C) Zinc finger
D) Leucine zipper

E) B) and D)
F) None of the above

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D

Which of the conditions would result in the greatest amount of transcription of the lac operon?  [glucose ] [lactose ] I.  high  high  II.  low  low  III.  high  low  IV.  low  high \begin{array} { l c c } & \text { [glucose } ] & \text { [lactose } ] \\ \text { I. } & \text { high } & \text { high } \\\text { II. } & \text { low } & \text { low } \\\text { III. } & \text { high } & \text { low } \\\text { IV. } & \text { low } & \text { high }\end{array}


A) I
B) II
C) III
D) IV

E) B) and C)
F) A) and C)

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The major difference between RNA initiation in eukaryotes and prokaryotes is the number of factors involved in the process.

A) True
B) False

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RNA synthesis begins at the base in the DNA sequence designated by the following number:


A) +1 (plus one)
B) 0 (zero)
C) −1 (minus one)
D) −10 region (minus ten)
E) It varies between genes.

F) All of the above
G) C) and D)

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TATA-binding protein (TBP) is normally required for transcription by


A) Pol I.
B) Pol II.
C) Pol III.
D) all of these polymerases.
E) none of these polymerases

F) None of the above
G) A) and E)

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Which of the following transcription factors is involved in the elongation phase of eukaryotic transcription?


A) TFIIA
B) TFIID
C) TFIIF
D) There are no transcription factors associated with elongation.

E) A) and B)
F) A) and C)

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RNA transcribed from the coding strand instead of the template strand


A) is called antisense RNA.
B) produces histones.
C) is tRNA.
D) never occurs.

E) A) and D)
F) B) and C)

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Which enzyme transcribes genes encoding tRNA in eukaryotes?


A) RNA polymerase I
B) RNA polymerase II
C) RNA polymerase III
D) Different tRNAs are transcribed by different RNA polymerases.

E) All of the above
F) A) and C)

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Ribozymes, the catalytic activity of RNA, were first discovered as part of the snRNA group.

A) True
B) False

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Which of the following is not true about RISC?


A) It is only involved in cleaving dsRNA from viruses
B) It is involved with processing of miRNA and siRNA
C) It uses a protein from the argonaut family
D) It unwinds dsRNA and eventually discards the passenger strand

E) A) and D)
F) C) and D)

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Operons


A) control the expression of constitutive genes.
B) are subject to positive or to negative control.
C) are not affected by mutations in the genes for repressors or inducers.
D) occur in both prokaryotes and eukaryotes.

E) All of the above
F) A) and B)

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Which of the following is not true?


A) The mechanism of activation of eukaryotic genes involves addition and removal of phosphate residues from some of the transcription factors.
B) In plants, there are 5 RNA polymerases.
C) RNA Pol IV is the primary RNA synthesizer in plants
D) Of the RNA Polymerases in eukaryotes, Pol II is the most extensively studied.

E) B) and C)
F) All of the above

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Response elements


A) are similar to operons in that they are controlled by a single promoter
B) are enhancers of transcription activated by metabolic factors
C) are not affected by steroids
D) are silencers of transcription triggered by the presence of metal ions

E) A) and D)
F) A) and C)

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B

Which of following statements describes a difference between replication of DNA and transcription of RNA?


A) Nucleoside triphosphates are the precursors for replication, but nucleoside diphosphates are used for transcription.
B) Both strands of DNA are copied in replication, but usually only one is copied in transcription.
C) Base pairing is used to copy the sequence in replication, but not in transcription.
D) The chain grows from the 5' to the 3' end in replication, but 3' to 5' in transcription.
E) None of these

F) B) and E)
G) A) and C)

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Phosphorylation of the CTD of RNA polymerase II occurs during which phase of transcription?


A) initial binding to the promoter
B) conversion from the closed complex to the open complex
C) termination of transcription
D) None of these

E) B) and D)
F) B) and C)

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The sequences in eukaryotic DNA known as introns are


A) those included in the final sequence of messenger RNA
B) the intervening sequences not expressed in the final sequence of messenger RNA
C) the binding sites for DNA polymerase
D) the binding sites for RNA polymerase

E) B) and D)
F) All of the above

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General transcription activation in eukaryotes requires


A) a specific enhancer common to all genes
B) a specific silencer common to all genes
C) a protein called Mediator
D) a CREB binding protein
E) none of these

F) C) and D)
G) B) and E)

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